ASSIGNMENTS
All assignments are due on Gradescope at 11:59pm Eastern Time.
LaTeX Template
The LaTeX template can be found here.
Homeworks
| Homework | Out | In | Support Files |
|---|---|---|---|
| Course Setup Form | 9/8/23 | 9/14/23 | |
| Homework 1: Alignment | 9/15/23 | 9/28/23 | |
| Homework 2: Alignment | 9/29/23 | 10/12/23 | files |
| Homework 3: KMP and DFAs | 10/13/23 | 10/29/23 | |
| Homework 4: Suffix Trees and Phylogeny | 11/10/23 | 11/17/23 | |
| Homework 5: Hidden Markov Models | 11/27/23 | 12/7/23 |
Projects
| Project | Out | In | Support Files |
|---|---|---|---|
| Project 0: Warmup | 9/8/23 | 9/21/23 | files |
| Project 1: Alignment | 9/29/23 | 10/12/23 | files |
| Project 2: Pattern Matching | 10/13/23 | 10/29/23 | files |
| Project 3: Phylogeny | 11/10/23 | 11/21/23 | |
| Project 4: Hidden Markov Models | 11/27/23 | 12/9/23 | files |
| Project 4: Hidden Markov Models (Application) | 12/1/23 | 12/9/23 |
Exams
| Exam | Out | In |
|---|---|---|
| Midterm (in person, covering all lecture material through 10/31) | 11/2/23 | |
| Final Exam (take home, cumulative) | 12/9/23 | 12/18/23 |
Final Project (those seeking 2810 credit only!)
| Checkpoints | Dates |
|---|---|
| Project Proposal Meetings | 11/6/23-11/10/23 |
| Project Presentations | 12/6/23-12/8/23 |
| Project Powerpoint, Paper, and Code | 12/11/23 |